Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Gm45041-201ENSMUST00000207366 3108 ntBASIC14.11□□□□□ -0.15
U2af1Q9D883 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Gm11544-201ENSMUST00000120215 382 ntBASIC14.11□□□□□ -0.15
U2af1Q9D883 Gm11354-201ENSMUST00000121974 422 ntBASIC14.11□□□□□ -0.15
U2af1Q9D883 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC14.11□□□□□ -0.15
U2af1Q9D883 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC14.11□□□□□ -0.15
U2af1Q9D883 Gm42710-201ENSMUST00000200608 985 ntBASIC14.11□□□□□ -0.15
U2af1Q9D883 Gm18499-201ENSMUST00000220808 1021 ntBASIC14.11□□□□□ -0.15
U2af1Q9D883 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
U2af1Q9D883 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.11□□□□□ -0.15
U2af1Q9D883 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC14.11□□□□□ -0.15
U2af1Q9D883 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
U2af1Q9D883 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC14.1□□□□□ -0.15
U2af1Q9D883 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC14.1□□□□□ -0.15
U2af1Q9D883 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.1□□□□□ -0.15
U2af1Q9D883 Gm12712-201ENSMUST00000120676 801 ntBASIC14.1□□□□□ -0.15
U2af1Q9D883 Gm5257-201ENSMUST00000121823 790 ntBASIC14.1□□□□□ -0.15
U2af1Q9D883 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC14.1□□□□□ -0.15
U2af1Q9D883 Gm28671-201ENSMUST00000187036 692 ntBASIC14.1□□□□□ -0.15
U2af1Q9D883 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
U2af1Q9D883 Gm42859-201ENSMUST00000199572 193 ntBASIC14.1□□□□□ -0.15
U2af1Q9D883 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC14.1□□□□□ -0.15
U2af1Q9D883 CT009713.2-201ENSMUST00000225532 1149 ntBASIC14.1□□□□□ -0.15
U2af1Q9D883 AC154806.7-201ENSMUST00000227998 202 ntBASIC14.1□□□□□ -0.15
U2af1Q9D883 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
U2af1Q9D883 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Gm43052-201ENSMUST00000201451 1628 ntBASIC14.1□□□□□ -0.15
U2af1Q9D883 Gm38192-201ENSMUST00000194364 1847 ntBASIC14.1□□□□□ -0.15
U2af1Q9D883 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
U2af1Q9D883 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
U2af1Q9D883 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
U2af1Q9D883 AC154220.1-201ENSMUST00000225033 1705 ntBASIC14.1□□□□□ -0.15
U2af1Q9D883 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
U2af1Q9D883 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
U2af1Q9D883 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
U2af1Q9D883 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
U2af1Q9D883 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
U2af1Q9D883 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
U2af1Q9D883 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Gm12337-201ENSMUST00000119634 400 ntBASIC14.09□□□□□ -0.15
U2af1Q9D883 Gm25288-201ENSMUST00000122800 265 ntBASIC14.09□□□□□ -0.15
U2af1Q9D883 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
U2af1Q9D883 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
U2af1Q9D883 Gm4862-201ENSMUST00000170405 438 ntBASIC14.09□□□□□ -0.15
U2af1Q9D883 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC14.09□□□□□ -0.15
U2af1Q9D883 Gm18801-201ENSMUST00000186616 536 ntBASIC14.09□□□□□ -0.15
U2af1Q9D883 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC14.09□□□□□ -0.15
U2af1Q9D883 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC14.09□□□□□ -0.15
U2af1Q9D883 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 AC164556.1-201ENSMUST00000221318 751 ntBASIC14.09□□□□□ -0.15
U2af1Q9D883 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Gm5449-201ENSMUST00000081132 357 ntBASIC14.09□□□□□ -0.15
U2af1Q9D883 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC14.09□□□□□ -0.15
U2af1Q9D883 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC14.09□□□□□ -0.15
U2af1Q9D883 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC14.09□□□□□ -0.15
U2af1Q9D883 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
U2af1Q9D883 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms