Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.49□□□□□ -0.89
Scrt1Q99M85 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Gm16547-201ENSMUST00000159474 293 ntBASIC9.49□□□□□ -0.89
Scrt1Q99M85 Gm18733-202ENSMUST00000174447 401 ntBASIC9.49□□□□□ -0.89
Scrt1Q99M85 Gm7765-201ENSMUST00000182585 974 ntBASIC9.49□□□□□ -0.89
Scrt1Q99M85 Gm7572-201ENSMUST00000182616 766 ntBASIC9.49□□□□□ -0.89
Scrt1Q99M85 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.49□□□□□ -0.89
Scrt1Q99M85 Gm44740-201ENSMUST00000205603 1614 ntBASIC9.49□□□□□ -0.89
Scrt1Q99M85 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Scrt1Q99M85 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Erich3-203ENSMUST00000189969 3460 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Gm12736-201ENSMUST00000119330 236 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Olfml3-204ENSMUST00000169286 874 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Gm38314-201ENSMUST00000195709 625 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Gm43866-201ENSMUST00000203894 839 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 AC107752.1-201ENSMUST00000219362 469 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 Gm18065-201ENSMUST00000221395 526 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.48□□□□□ -0.89
Scrt1Q99M85 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Scrt1Q99M85 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Scrt1Q99M85 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms