Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC11.43□□□□□ -0.58
Clp1Q99LI9 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 BB187690-201ENSMUST00000198619 1176 ntBASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm10581-201ENSMUST00000097986 231 ntBASIC11.43□□□□□ -0.58
Clp1Q99LI9 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm22751-201ENSMUST00000102077 109 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 Mir692-3-201ENSMUST00000102079 109 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 Mir692-2-201ENSMUST00000102081 109 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm26208-201ENSMUST00000158677 124 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm5873-201ENSMUST00000177157 1066 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm5190-201ENSMUST00000192434 357 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm18122-201ENSMUST00000211390 904 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm8557-201ENSMUST00000220777 475 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 AC115784.1-201ENSMUST00000227687 1010 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 AC107711.3-201ENSMUST00000228939 1035 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm25125-201ENSMUST00000083340 136 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm42478-201ENSMUST00000199252 1467 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Gm38034-201ENSMUST00000193915 2069 ntBASIC11.42□□□□□ -0.58
Clp1Q99LI9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.42□□□□□ -0.58
Clp1Q99LI9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clp1Q99LI9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clp1Q99LI9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clp1Q99LI9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.41□□□□□ -0.58
Clp1Q99LI9 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clp1Q99LI9 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clp1Q99LI9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clp1Q99LI9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clp1Q99LI9 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clp1Q99LI9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Clp1Q99LI9 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clp1Q99LI9 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms