Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 AC154197.1-201ENSMUST00000225136 1382 ntBASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smarcd2Q99JR8 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm6783-201ENSMUST00000120916 1437 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm22751-201ENSMUST00000102077 109 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Mir692-3-201ENSMUST00000102079 109 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Mir692-2-201ENSMUST00000102081 109 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm13700-201ENSMUST00000118624 1128 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm11473-201ENSMUST00000118980 359 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm14997-201ENSMUST00000119232 636 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm20091-201ENSMUST00000179683 189 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm8707-201ENSMUST00000183325 980 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm44540-201ENSMUST00000205640 354 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm2716-201ENSMUST00000212350 643 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 AC132384.2-201ENSMUST00000218018 526 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm45663-201ENSMUST00000210429 1632 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 AC137950.2-202ENSMUST00000227150 1635 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Smarcd2Q99JR8 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm14639-201ENSMUST00000120850 866 ntBASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm11736-201ENSMUST00000121468 505 ntBASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm25394-201ENSMUST00000157338 133 ntBASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm17799-201ENSMUST00000183270 667 ntBASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Gm18256-201ENSMUST00000209087 907 ntBASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 AC139155.1-201ENSMUST00000226043 444 ntBASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smarcd2Q99JR8 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms