Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.14□□□□□ -0.79
Clrn1Q8K445 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm16518-201ENSMUST00000117960 508 ntBASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm14497-201ENSMUST00000119537 580 ntBASIC10.14□□□□□ -0.79
Clrn1Q8K445 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm22442-201ENSMUST00000157256 144 ntBASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm25226-201ENSMUST00000158198 123 ntBASIC10.14□□□□□ -0.79
Clrn1Q8K445 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.14□□□□□ -0.79
Clrn1Q8K445 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm6677-201ENSMUST00000195100 441 ntBASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Clrn1Q8K445 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Mir1901-201ENSMUST00000122616 78 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm17221-201ENSMUST00000163909 481 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm5244-201ENSMUST00000164001 339 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm17073-201ENSMUST00000168069 556 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm25072-201ENSMUST00000175233 235 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm26976-201ENSMUST00000182929 908 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm28833-201ENSMUST00000189671 559 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm37597-201ENSMUST00000191853 382 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm7430-201ENSMUST00000193824 1144 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm5865-201ENSMUST00000198713 637 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm18466-201ENSMUST00000209147 499 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm8162-201ENSMUST00000213951 665 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Capsl-202ENSMUST00000226688 739 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm7589-201ENSMUST00000085631 534 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.13□□□□□ -0.79
Clrn1Q8K445 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Clrn1Q8K445 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms