Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Gm15554-201ENSMUST00000120406 913 ntBASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Mir6979-201ENSMUST00000183927 56 ntBASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Gm43097-201ENSMUST00000196867 151 ntBASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Gm42780-201ENSMUST00000197083 734 ntBASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Gm42816-201ENSMUST00000198433 325 ntBASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Gm42710-201ENSMUST00000200608 985 ntBASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Gm7880-201ENSMUST00000203748 871 ntBASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Gm23680-201ENSMUST00000083162 164 ntBASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Gm37516-201ENSMUST00000192593 1954 ntBASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm6425-201ENSMUST00000136332 790 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm20392-201ENSMUST00000173047 701 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm9463-201ENSMUST00000206707 601 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm39288-201ENSMUST00000210554 446 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Snora73b-201ENSMUST00000083419 205 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Gm43274-201ENSMUST00000202545 5000 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cchcr1Q8K2I2 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Gm8684-201ENSMUST00000195078 1564 ntBASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Gm27953-201ENSMUST00000185171 143 ntBASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Gm17877-201ENSMUST00000192578 814 ntBASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.66□□□□□ -0.38
Cchcr1Q8K2I2 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms