Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Ccdc17Q8CE13 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
Ccdc17Q8CE13 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc17Q8CE13 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc17Q8CE13 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Ccdc17Q8CE13 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc17Q8CE13 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Ccdc17Q8CE13 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc17Q8CE13 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc17Q8CE13 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Ccdc17Q8CE13 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
Ccdc17Q8CE13 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Gm8152-201ENSMUST00000120842 637 ntBASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Gm10254-201ENSMUST00000052888 867 ntBASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Gm8420-201ENSMUST00000097103 598 ntBASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc17Q8CE13 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gm4917-201ENSMUST00000121452 650 ntBASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gm7765-201ENSMUST00000182585 974 ntBASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Wbp1-209ENSMUST00000205023 716 ntBASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Arhgef33-210ENSMUST00000225548 456 ntBASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gm26782-203ENSMUST00000227103 751 ntBASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc17Q8CE13 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.25□□□□□ -0.61
Ccdc17Q8CE13 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc17Q8CE13 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms