Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Gm15352-201ENSMUST00000118696 270 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Gm15285-201ENSMUST00000119271 473 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Gm11988-201ENSMUST00000122321 1069 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Gm27341-201ENSMUST00000183570 106 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Gm44315-201ENSMUST00000203041 219 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Mir433-201ENSMUST00000093564 124 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Gm42587-201ENSMUST00000198462 1981 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.59□□□□□ -0.88
Lysmd4Q8CC84 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gm7061-201ENSMUST00000118127 1416 ntBASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gm7857-201ENSMUST00000117957 358 ntBASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gm37905-201ENSMUST00000195310 341 ntBASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Mt1-202ENSMUST00000211807 1085 ntBASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gm8162-201ENSMUST00000213951 665 ntBASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lysmd4Q8CC84 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms