Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm14017-201ENSMUST00000121934 386 ntBASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm22144-201ENSMUST00000157402 102 ntBASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm6407-201ENSMUST00000176468 549 ntBASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm28450-201ENSMUST00000187349 638 ntBASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm29543-201ENSMUST00000188138 967 ntBASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm37020-201ENSMUST00000195303 992 ntBASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Gm10748-202ENSMUST00000194396 2379 ntBASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scaf4Q6PFF0 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gm37826-201ENSMUST00000195329 322 ntBASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gm44420-201ENSMUST00000203669 490 ntBASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gm7848-201ENSMUST00000210739 718 ntBASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scaf4Q6PFF0 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms