Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC13.81□□□□□ -0.2
Clcn1Q64347 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clcn1Q64347 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clcn1Q64347 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Clcn1Q64347 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.8□□□□□ -0.2
Clcn1Q64347 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Clcn1Q64347 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm13183-201ENSMUST00000118615 789 ntBASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm6441-201ENSMUST00000120983 696 ntBASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm16288-201ENSMUST00000137940 367 ntBASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm23582-201ENSMUST00000158530 139 ntBASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm20493-201ENSMUST00000173706 213 ntBASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Mir6359-201ENSMUST00000183668 81 ntBASIC13.8□□□□□ -0.2
Clcn1Q64347 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm7445-201ENSMUST00000192115 340 ntBASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm34272-201ENSMUST00000208886 253 ntBASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC13.8□□□□□ -0.2
Clcn1Q64347 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clcn1Q64347 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clcn1Q64347 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcn1Q64347 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm6755-201ENSMUST00000100598 864 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm6740-201ENSMUST00000100617 864 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Clcn1Q64347 Defa-ps4-201ENSMUST00000118021 183 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm16209-201ENSMUST00000118457 627 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm10171-201ENSMUST00000126220 628 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm25653-201ENSMUST00000158473 138 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm16112-201ENSMUST00000159075 382 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm44498-201ENSMUST00000199509 111 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm45893-201ENSMUST00000211899 247 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC13.79□□□□□ -0.2
Clcn1Q64347 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC13.79□□□□□ -0.2
Clcn1Q64347 CT025603.1-201ENSMUST00000224040 448 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm25131-201ENSMUST00000082653 151 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm10233-201ENSMUST00000089275 628 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm10238-201ENSMUST00000089689 408 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clcn1Q64347 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.79□□□□□ -0.2
Clcn1Q64347 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.79□□□□□ -0.2
Clcn1Q64347 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms