Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Gm18014-201ENSMUST00000183369 817 ntBASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Gm19918-201ENSMUST00000194858 400 ntBASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tnfaip3Q60769 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.17□□□□□ -0.78
Tnfaip3Q60769 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.17□□□□□ -0.78
Tnfaip3Q60769 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.17□□□□□ -0.78
Tnfaip3Q60769 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Gm22937-201ENSMUST00000103954 131 ntBASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Gm7536-201ENSMUST00000077389 444 ntBASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Tnfaip3Q60769 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms