Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm16441-201ENSMUST00000138176 924 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm6038-201ENSMUST00000154310 948 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm5801-201ENSMUST00000182247 780 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm28671-201ENSMUST00000187036 692 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm42710-201ENSMUST00000200608 985 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 AC154431.1-201ENSMUST00000224910 880 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm26782-203ENSMUST00000227103 751 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps54Q5SPW0 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Gm12453-201ENSMUST00000121981 331 ntBASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Gm25569-201ENSMUST00000157175 131 ntBASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.87□□□□□ -0.35
Vps54Q5SPW0 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps54Q5SPW0 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 BC043934-202ENSMUST00000185694 2356 ntBASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Gm26208-201ENSMUST00000158677 124 ntBASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Gm7319-201ENSMUST00000210047 778 ntBASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps54Q5SPW0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms