Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 CT025639.2-202ENSMUST00000225298 1630 ntBASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim43aQ3TL54 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Gm15554-201ENSMUST00000120406 913 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Gm11836-201ENSMUST00000121022 441 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Gm17391-201ENSMUST00000171036 126 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Gm29787-201ENSMUST00000222129 849 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim43aQ3TL54 Gm37583-201ENSMUST00000195460 2487 ntBASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gm9220-201ENSMUST00000190721 2544 ntBASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gm11956-201ENSMUST00000119525 512 ntBASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gm14585-201ENSMUST00000120713 634 ntBASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gm45770-201ENSMUST00000212105 616 ntBASIC11.36□□□□□ -0.59
Trim43aQ3TL54 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim43aQ3TL54 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms