Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm5174-201ENSMUST00000171131 1423 ntBASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Gm37582-201ENSMUST00000192953 1409 ntBASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Gm34248-201ENSMUST00000200027 474 ntBASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 CT009550.1-201ENSMUST00000225750 864 ntBASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 AC174647.1-201ENSMUST00000227419 1271 ntBASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Gm17541-201ENSMUST00000080062 525 ntBASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Gm38111-201ENSMUST00000194817 2741 ntBASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chrna5Q2MKA5 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Gm24470-201ENSMUST00000104486 132 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Fam220-ps-201ENSMUST00000116535 783 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Gm25154-201ENSMUST00000157123 119 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Gm19566-201ENSMUST00000199576 610 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 AC166061.1-201ENSMUST00000225163 1138 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 AC161877.1-201ENSMUST00000227736 699 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna5Q2MKA5 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Mir1190-201ENSMUST00000116925 96 ntBASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gm13898-201ENSMUST00000141865 610 ntBASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gm28916-201ENSMUST00000186988 699 ntBASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gm8918-201ENSMUST00000190587 1087 ntBASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gm30652-201ENSMUST00000199103 430 ntBASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.72□□□□□ -0.37
Chrna5Q2MKA5 Gm6426-201ENSMUST00000209048 854 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms