Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ebf1Q07802 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ebf1Q07802 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Ebf1Q07802 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 Gm22344-201ENSMUST00000122642 278 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 Gm25288-201ENSMUST00000122800 265 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 Gm24943-201ENSMUST00000158329 433 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 Gm24312-201ENSMUST00000178677 119 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.96□□□□□ -0.65
Ebf1Q07802 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 Gm8234-201ENSMUST00000198523 1107 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.96□□□□□ -0.65
Ebf1Q07802 CT025603.1-201ENSMUST00000224040 448 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 Nsmce2-203ENSMUST00000227173 1122 ntBASIC10.96□□□□□ -0.65
Ebf1Q07802 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ebf1Q07802 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ebf1Q07802 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ebf1Q07802 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ebf1Q07802 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ebf1Q07802 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ebf1Q07802 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ebf1Q07802 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ebf1Q07802 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ebf1Q07802 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ebf1Q07802 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ebf1Q07802 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Ebf1Q07802 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ebf1Q07802 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ebf1Q07802 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ebf1Q07802 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.95□□□□□ -0.66
Ebf1Q07802 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm12337-201ENSMUST00000119634 400 ntBASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.95□□□□□ -0.66
Ebf1Q07802 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.95□□□□□ -0.66
Ebf1Q07802 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm6518-201ENSMUST00000208450 342 ntBASIC10.95□□□□□ -0.66
Ebf1Q07802 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC10.95□□□□□ -0.66
Ebf1Q07802 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.95□□□□□ -0.66
Ebf1Q07802 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.95□□□□□ -0.66
Ebf1Q07802 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ebf1Q07802 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms