Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm6344-201ENSMUST00000075962 483 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Lmo4P61969 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC8.68□□□□□ -1.02
Lmo4P61969 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Lmo4P61969 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 AC124561.1-202ENSMUST00000228652 1929 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Lmo4P61969 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Lmo4P61969 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm21142-201ENSMUST00000179999 2604 ntBASIC8.67□□□□□ -1.02
Lmo4P61969 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Lmo4P61969 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Lmo4P61969 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm4943-201ENSMUST00000132879 424 ntBASIC8.67□□□□□ -1.02
Lmo4P61969 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC8.67□□□□□ -1.02
Lmo4P61969 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Mir6359-201ENSMUST00000183668 81 ntBASIC8.67□□□□□ -1.02
Lmo4P61969 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm6170-201ENSMUST00000187672 1388 ntBASIC8.67□□□□□ -1.02
Lmo4P61969 Gm4430-202ENSMUST00000193902 1041 ntBASIC8.67□□□□□ -1.02
Lmo4P61969 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC8.67□□□□□ -1.02
Lmo4P61969 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC8.67□□□□□ -1.02
Lmo4P61969 Gm5311-201ENSMUST00000203518 709 ntBASIC8.67□□□□□ -1.02
Lmo4P61969 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC8.67□□□□□ -1.02
Lmo4P61969 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC8.67□□□□□ -1.02
Lmo4P61969 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm7242-201ENSMUST00000221134 705 ntBASIC8.67□□□□□ -1.02
Lmo4P61969 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Lmo4P61969 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Lmo4P61969 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Lmo4P61969 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Lmo4P61969 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Gm45675-201ENSMUST00000211202 3429 ntBASIC8.67□□□□□ -1.02
Lmo4P61969 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC8.67□□□□□ -1.02
Lmo4P61969 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Lmo4P61969 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC8.66□□□□□ -1.02
Lmo4P61969 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Lmo4P61969 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC8.66□□□□□ -1.02
Lmo4P61969 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Lmo4P61969 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Lmo4P61969 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Lmo4P61969 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Lmo4P61969 Gm9035-201ENSMUST00000218318 1697 ntBASIC8.66□□□□□ -1.02
Lmo4P61969 Gm43052-201ENSMUST00000201451 1628 ntBASIC8.66□□□□□ -1.02
Lmo4P61969 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Lmo4P61969 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Lmo4P61969 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Lmo4P61969 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms