Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Atxn1P54254 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Atxn1P54254 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Atxn1P54254 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Atxn1P54254 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Gm25288-201ENSMUST00000122800 265 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.75□□□□□ -0.69
Atxn1P54254 Gm7928-201ENSMUST00000181249 701 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Gm8643-201ENSMUST00000195228 625 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Gm43564-201ENSMUST00000196185 211 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Gm45090-201ENSMUST00000208775 1148 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC10.75□□□□□ -0.69
Atxn1P54254 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Atxn1P54254 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Atxn1P54254 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Atxn1P54254 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Atxn1P54254 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Atxn1P54254 Gm13608-201ENSMUST00000121807 1406 ntBASIC10.75□□□□□ -0.69
Atxn1P54254 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Atxn1P54254 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Atxn1P54254 Mir598-201ENSMUST00000102094 79 ntBASIC10.74□□□□□ -0.69
Atxn1P54254 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Gm14071-201ENSMUST00000117817 509 ntBASIC10.74□□□□□ -0.69
Atxn1P54254 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Gm5873-201ENSMUST00000177157 1066 ntBASIC10.74□□□□□ -0.69
Atxn1P54254 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Atxn1P54254 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Atxn1P54254 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.74□□□□□ -0.69
Atxn1P54254 Gm7833-201ENSMUST00000183288 990 ntBASIC10.74□□□□□ -0.69
Atxn1P54254 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Atxn1P54254 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC10.74□□□□□ -0.69
Atxn1P54254 Gm8268-201ENSMUST00000209683 458 ntBASIC10.74□□□□□ -0.69
Atxn1P54254 AC124356.1-201ENSMUST00000221469 698 ntBASIC10.74□□□□□ -0.69
Atxn1P54254 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Gm7589-201ENSMUST00000085631 534 ntBASIC10.74□□□□□ -0.69
Atxn1P54254 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Atxn1P54254 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.74□□□□□ -0.69
Atxn1P54254 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Atxn1P54254 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.74□□□□□ -0.69
Atxn1P54254 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Atxn1P54254 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms