Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox1P53783 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Sox1P53783 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sox1P53783 Gm11929-201ENSMUST00000118175 945 ntBASIC11.06□□□□□ -0.64
Sox1P53783 Gm5400-201ENSMUST00000118494 943 ntBASIC11.06□□□□□ -0.64
Sox1P53783 Gm16418-201ENSMUST00000118577 171 ntBASIC11.06□□□□□ -0.64
Sox1P53783 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC11.06□□□□□ -0.64
Sox1P53783 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Gm4996-201ENSMUST00000122042 784 ntBASIC11.06□□□□□ -0.64
Sox1P53783 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC11.06□□□□□ -0.64
Sox1P53783 Gm25145-201ENSMUST00000177640 110 ntBASIC11.06□□□□□ -0.64
Sox1P53783 Trav9n-1-201ENSMUST00000185224 339 ntBASIC11.06□□□□□ -0.64
Sox1P53783 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox1P53783 Gm28381-201ENSMUST00000188403 193 ntBASIC11.06□□□□□ -0.64
Sox1P53783 Gm3116-201ENSMUST00000189440 1116 ntBASIC11.06□□□□□ -0.64
Sox1P53783 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.06□□□□□ -0.64
Sox1P53783 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Sox1P53783 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.06□□□□□ -0.64
Sox1P53783 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Sox1P53783 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
Sox1P53783 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox1P53783 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sox1P53783 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox1P53783 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sox1P53783 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox1P53783 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox1P53783 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 AC160138.2-201ENSMUST00000220255 1531 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox1P53783 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox1P53783 Gm14276-201ENSMUST00000117941 720 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Gm12420-201ENSMUST00000119869 1048 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Sox1P53783 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC11.05□□□□□ -0.64
Sox1P53783 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC11.05□□□□□ -0.64
Sox1P53783 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Sox1P53783 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Gm8488-201ENSMUST00000176112 1280 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Gm7565-201ENSMUST00000203611 623 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Gm44167-201ENSMUST00000204957 1878 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Gm44863-201ENSMUST00000207613 1422 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Gm19090-201ENSMUST00000218187 774 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Gm6129-201ENSMUST00000220725 801 ntBASIC11.05□□□□□ -0.64
Sox1P53783 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Gm26440-201ENSMUST00000082591 129 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.05□□□□□ -0.64
Sox1P53783 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox1P53783 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox1P53783 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox1P53783 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms