Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Gm25226-201ENSMUST00000158198 123 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Gm8723-201ENSMUST00000166076 820 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Gm8701-201ENSMUST00000169259 874 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Gm20392-201ENSMUST00000173047 701 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.62□□□□□ -0.71
Pdx1P52946 Gm24809-201ENSMUST00000175318 271 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pdx1P52946 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Pdx1P52946 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.62□□□□□ -0.71
Pdx1P52946 Gm18035-201ENSMUST00000211962 589 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Gm26670-202ENSMUST00000226862 340 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pdx1P52946 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.62□□□□□ -0.71
Pdx1P52946 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pdx1P52946 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
Pdx1P52946 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pdx1P52946 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.61□□□□□ -0.71
Pdx1P52946 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pdx1P52946 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.61□□□□□ -0.71
Pdx1P52946 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC10.61□□□□□ -0.71
Pdx1P52946 Gm11560-201ENSMUST00000117567 948 ntBASIC10.61□□□□□ -0.71
Pdx1P52946 Gm12795-201ENSMUST00000117594 539 ntBASIC10.61□□□□□ -0.71
Pdx1P52946 Gm15264-201ENSMUST00000118050 502 ntBASIC10.61□□□□□ -0.71
Pdx1P52946 Gm15554-201ENSMUST00000120406 913 ntBASIC10.61□□□□□ -0.71
Pdx1P52946 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.61□□□□□ -0.71
Pdx1P52946 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.61□□□□□ -0.71
Pdx1P52946 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pdx1P52946 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.61□□□□□ -0.71
Pdx1P52946 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Gm19918-201ENSMUST00000194858 400 ntBASIC10.61□□□□□ -0.71
Pdx1P52946 Gm43249-201ENSMUST00000200464 458 ntBASIC10.61□□□□□ -0.71
Pdx1P52946 Gm44605-201ENSMUST00000206892 949 ntBASIC10.61□□□□□ -0.71
Pdx1P52946 Gm18059-201ENSMUST00000208073 580 ntBASIC10.61□□□□□ -0.71
Pdx1P52946 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.61□□□□□ -0.71
Pdx1P52946 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.61□□□□□ -0.71
Pdx1P52946 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pdx1P52946 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pdx1P52946 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pdx1P52946 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.61□□□□□ -0.71
Pdx1P52946 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Pdx1P52946 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pdx1P52946 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.61□□□□□ -0.71
Pdx1P52946 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pdx1P52946 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pdx1P52946 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pdx1P52946 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.6□□□□□ -0.71
Pdx1P52946 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pdx1P52946 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms