Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.07□□□□□ -0.64
Cxcl12P40224 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl12P40224 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl12P40224 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm42521-201ENSMUST00000199190 2040 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm26208-201ENSMUST00000158677 124 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Mir3060-201ENSMUST00000175339 83 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm2021-201ENSMUST00000190623 464 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm43103-201ENSMUST00000199021 802 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm19228-201ENSMUST00000214030 717 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 AC151971.6-201ENSMUST00000216193 866 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 CT025547.1-201ENSMUST00000225127 578 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Gm10254-201ENSMUST00000052888 867 ntBASIC11.06□□□□□ -0.64
Cxcl12P40224 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl12P40224 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl12P40224 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.05□□□□□ -0.64
Cxcl12P40224 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cxcl12P40224 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.05□□□□□ -0.64
Cxcl12P40224 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Cxcl12P40224 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.05□□□□□ -0.64
Cxcl12P40224 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC11.05□□□□□ -0.64
Cxcl12P40224 Gm14108-201ENSMUST00000122234 494 ntBASIC11.05□□□□□ -0.64
Cxcl12P40224 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC11.05□□□□□ -0.64
Cxcl12P40224 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Cxcl12P40224 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Gm28381-201ENSMUST00000188403 193 ntBASIC11.05□□□□□ -0.64
Cxcl12P40224 Gm28180-201ENSMUST00000189608 722 ntBASIC11.05□□□□□ -0.64
Cxcl12P40224 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cxcl12P40224 Gm42617-201ENSMUST00000197640 1229 ntBASIC11.05□□□□□ -0.64
Cxcl12P40224 Gm30652-201ENSMUST00000199103 430 ntBASIC11.05□□□□□ -0.64
Cxcl12P40224 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms