Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.39□□□□□ -0.91
Cd28P31041 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.39□□□□□ -0.91
Cd28P31041 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.39□□□□□ -0.91
Cd28P31041 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Cd28P31041 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cd28P31041 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.38□□□□□ -0.91
Cd28P31041 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.38□□□□□ -0.91
Cd28P31041 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Cd28P31041 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Cd28P31041 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Cd28P31041 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.38□□□□□ -0.91
Cd28P31041 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.38□□□□□ -0.91
Cd28P31041 Gm7783-201ENSMUST00000204795 781 ntBASIC9.38□□□□□ -0.91
Cd28P31041 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.38□□□□□ -0.91
Cd28P31041 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.38□□□□□ -0.91
Cd28P31041 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.38□□□□□ -0.91
Cd28P31041 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC9.38□□□□□ -0.91
Cd28P31041 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Cd28P31041 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 AC124561.1-202ENSMUST00000228652 1929 ntBASIC9.38□□□□□ -0.91
Cd28P31041 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.38□□□□□ -0.91
Cd28P31041 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.38□□□□□ -0.91
Cd28P31041 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Cd28P31041 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Gm43052-201ENSMUST00000201451 1628 ntBASIC9.38□□□□□ -0.91
Cd28P31041 CT025639.2-202ENSMUST00000225298 1630 ntBASIC9.38□□□□□ -0.91
Cd28P31041 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Cd28P31041 Gm37084-201ENSMUST00000191688 5898 ntBASIC9.38□□□□□ -0.91
Cd28P31041 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Cd28P31041 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Gm14058-201ENSMUST00000116082 735 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Gm13035-201ENSMUST00000117496 342 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Gm9133-201ENSMUST00000118289 540 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.37□□□□□ -0.91
Cd28P31041 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.37□□□□□ -0.91
Cd28P31041 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.37□□□□□ -0.91
Cd28P31041 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.37□□□□□ -0.91
Cd28P31041 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.37□□□□□ -0.91
Cd28P31041 Gm18367-201ENSMUST00000176139 600 ntBASIC9.37□□□□□ -0.91
Cd28P31041 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.37□□□□□ -0.91
Cd28P31041 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms