Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm9979-201ENSMUST00000069457 3005 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nedd8P29595 Shc4-201ENSMUST00000042246 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nedd8P29595 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
Nedd8P29595 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nedd8P29595 Tgfbi-201ENSMUST00000045173 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nedd8P29595 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.8□□□□□ -0.84
Nedd8P29595 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nedd8P29595 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nedd8P29595 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Nedd8P29595 Scfd2-208ENSMUST00000151474 3834 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nedd8P29595 Synj2-207ENSMUST00000115788 3498 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nedd8P29595 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Nedd8P29595 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.8□□□□□ -0.84
Nedd8P29595 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Nedd8P29595 Gm44629-201ENSMUST00000206951 1840 ntBASIC9.79□□□□□ -0.84
Nedd8P29595 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Gm46218-202ENSMUST00000215520 1956 ntBASIC9.79□□□□□ -0.84
Nedd8P29595 Mov10-207ENSMUST00000168015 3460 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
Nedd8P29595 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Col10a1-201ENSMUST00000105511 3130 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Nedd8P29595 Gm42833-201ENSMUST00000196019 2124 ntBASIC9.79□□□□□ -0.84
Nedd8P29595 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Eif3c-201ENSMUST00000032992 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Nadsyn1-201ENSMUST00000033415 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.79□□□□□ -0.84
Nedd8P29595 Gm11663-201ENSMUST00000117888 290 ntBASIC9.79□□□□□ -0.84
Nedd8P29595 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.79□□□□□ -0.84
Nedd8P29595 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Nedd8P29595 Gm19246-201ENSMUST00000173599 255 ntBASIC9.79□□□□□ -0.84
Nedd8P29595 Gm8815-201ENSMUST00000173809 620 ntBASIC9.79□□□□□ -0.84
Nedd8P29595 Gm27046-201ENSMUST00000182160 463 ntBASIC9.79□□□□□ -0.84
Nedd8P29595 Gm7504-201ENSMUST00000201449 424 ntBASIC9.79□□□□□ -0.84
Nedd8P29595 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.79□□□□□ -0.84
Nedd8P29595 Gm8342-201ENSMUST00000209839 757 ntBASIC9.79□□□□□ -0.84
Nedd8P29595 Gm6867-201ENSMUST00000219165 425 ntBASIC9.79□□□□□ -0.84
Nedd8P29595 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Ncaph2-203ENSMUST00000088717 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Rsrc1-201ENSMUST00000046542 3062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Nedd8P29595 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Nedd8P29595 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Plcd4-201ENSMUST00000027362 2977 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Nedd8P29595 Ccdc40-202ENSMUST00000053440 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Mmel1-201ENSMUST00000079269 2934 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Nedd8P29595 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Plk4-201ENSMUST00000026858 3479 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nedd8P29595 Atg7-201ENSMUST00000032457 3761 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Nedd4l-211ENSMUST00000226058 3393 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Gm43052-201ENSMUST00000201451 1628 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Stk36-202ENSMUST00000087186 4065 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC9.78□□□□□ -0.84
Nedd8P29595 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC9.78□□□□□ -0.84
Nedd8P29595 B930082K07Rik-201ENSMUST00000181046 2478 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Alox8-201ENSMUST00000021262 3226 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Gm14109-201ENSMUST00000118814 309 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 Gm11956-201ENSMUST00000119525 512 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC9.78□□□□□ -0.84
Nedd8P29595 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.78□□□□□ -0.84
Nedd8P29595 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Nedd8P29595 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nedd8P29595 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms