Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm20781-201ENSMUST00000193154 693 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm21736-201ENSMUST00000195399 693 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm42430-201ENSMUST00000197209 616 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm5178-201ENSMUST00000219380 898 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm5641-201ENSMUST00000091130 1488 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.06□□□□□ -0.96
Hoxa3P02831 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Spata33-207ENSMUST00000212760 4074 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Hoxa3P02831 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hoxa3P02831 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.06□□□□□ -0.96
Hoxa3P02831 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.05□□□□□ -0.96
Hoxa3P02831 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm14592-201ENSMUST00000117201 560 ntBASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm11380-201ENSMUST00000118067 560 ntBASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm14234-201ENSMUST00000119539 845 ntBASIC9.05□□□□□ -0.96
Hoxa3P02831 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm17070-201ENSMUST00000170463 784 ntBASIC9.05□□□□□ -0.96
Hoxa3P02831 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Mir8091-201ENSMUST00000183602 139 ntBASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm45500-201ENSMUST00000211676 803 ntBASIC9.05□□□□□ -0.96
Hoxa3P02831 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Gm42499-201ENSMUST00000196193 1412 ntBASIC9.05□□□□□ -0.96
Hoxa3P02831 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Hoxa3P02831 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hoxa3P02831 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Hoxa3P02831 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxa3P02831 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxa3P02831 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hoxa3P02831 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms