Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.13□□□□□ -0.63
AlyrefO08583 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AlyrefO08583 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
AlyrefO08583 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
AlyrefO08583 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AlyrefO08583 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AlyrefO08583 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
AlyrefO08583 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
AlyrefO08583 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 Gm13215-201ENSMUST00000117559 472 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 Gm14571-201ENSMUST00000118292 570 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.12□□□□□ -0.63
AlyrefO08583 Gm16329-201ENSMUST00000148174 371 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.12□□□□□ -0.63
AlyrefO08583 Gm20091-201ENSMUST00000179683 189 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 Gm37819-201ENSMUST00000194626 1065 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.12□□□□□ -0.63
AlyrefO08583 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 AC134607.1-201ENSMUST00000214707 485 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 Rce1-203ENSMUST00000224707 1255 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 AC134860.5-201ENSMUST00000225071 1249 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
AlyrefO08583 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.12□□□□□ -0.63
AlyrefO08583 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
AlyrefO08583 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
AlyrefO08583 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
AlyrefO08583 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
AlyrefO08583 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
AlyrefO08583 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm12435-201ENSMUST00000118949 1016 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 Gm13898-201ENSMUST00000141865 610 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm22662-201ENSMUST00000175290 256 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 Gm27316-201ENSMUST00000184884 277 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm18692-201ENSMUST00000193047 511 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
AlyrefO08583 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm19212-201ENSMUST00000216642 862 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC11.11□□□□□ -0.63
AlyrefO08583 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC11.11□□□□□ -0.63
AlyrefO08583 Gm18030-201ENSMUST00000222163 731 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 AC163038.1-201ENSMUST00000223632 1142 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 AC154757.2-201ENSMUST00000228885 743 ntBASIC11.11□□□□□ -0.63
AlyrefO08583 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
AlyrefO08583 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
AlyrefO08583 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms