Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Uhrf1-204ENSMUST00000113039 3391 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Gm45768-201ENSMUST00000206763 3202 ntBASIC10.28□□□□□ -0.76
Ube4bQ9ES00 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.76
Ube4bQ9ES00 Gm9271-201ENSMUST00000185988 2580 ntBASIC10.27□□□□□ -0.76
Ube4bQ9ES00 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ube4bQ9ES00 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ube4bQ9ES00 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ube4bQ9ES00 AC159813.1-201ENSMUST00000222671 2263 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ube4bQ9ES00 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Ube4bQ9ES00 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ube4bQ9ES00 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm4810-201ENSMUST00000177721 1607 ntBASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm42979-201ENSMUST00000196287 2228 ntBASIC10.27□□□□□ -0.77
Ube4bQ9ES00 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Galnt1-201ENSMUST00000000430 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ube4bQ9ES00 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm42826-201ENSMUST00000197548 2639 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm23949-201ENSMUST00000104027 127 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm11509-201ENSMUST00000117358 325 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm7150-201ENSMUST00000122032 981 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm26083-201ENSMUST00000157904 193 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm4310-201ENSMUST00000177847 889 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm7985-201ENSMUST00000183329 981 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm37666-201ENSMUST00000194110 866 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Gm44262-201ENSMUST00000204969 372 ntBASIC10.26□□□□□ -0.77
Ube4bQ9ES00 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms