Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Gm14034-201ENSMUST00000120147 551 ntBASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Gm6425-201ENSMUST00000136332 790 ntBASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Gm43726-201ENSMUST00000199110 775 ntBASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Gm8170-201ENSMUST00000218581 945 ntBASIC10.59□□□□□ -0.71
Rrp8Q9DB85 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Atf7-201ENSMUST00000096143 390 ntBASIC10.59□□□□□ -0.71
Rrp8Q9DB85 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.59□□□□□ -0.71
Rrp8Q9DB85 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.71
Rrp8Q9DB85 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gm23132-201ENSMUST00000104254 132 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gm15636-201ENSMUST00000119205 668 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gm8226-201ENSMUST00000190511 798 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gm37851-201ENSMUST00000193871 889 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gm40414-201ENSMUST00000197608 481 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 AC154585.1-201ENSMUST00000218917 997 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 AC140314.1-201ENSMUST00000219549 554 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gm22341-201ENSMUST00000083775 129 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gm10238-201ENSMUST00000089689 408 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rrp8Q9DB85 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rrp8Q9DB85 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rrp8Q9DB85 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rrp8Q9DB85 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rrp8Q9DB85 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rrp8Q9DB85 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rrp8Q9DB85 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rrp8Q9DB85 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rrp8Q9DB85 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rrp8Q9DB85 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rrp8Q9DB85 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms