Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Zfp389-202ENSMUST00000224437 1234 ntBASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Rce1-203ENSMUST00000224707 1255 ntBASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gm38309-201ENSMUST00000192063 1518 ntBASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx54Q8K4L0 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm38348-201ENSMUST00000191718 2273 ntBASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm24470-201ENSMUST00000104486 132 ntBASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm23908-201ENSMUST00000104599 132 ntBASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm11191-201ENSMUST00000117231 610 ntBASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm4398-201ENSMUST00000182698 992 ntBASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 AC160929.1-201ENSMUST00000221247 415 ntBASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 n-R5s25-201ENSMUST00000082923 119 ntBASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ddx54Q8K4L0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Gm13135-201ENSMUST00000117628 3121 ntBASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Gm16560-201ENSMUST00000159115 404 ntBASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Trav9n-1-201ENSMUST00000185224 339 ntBASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Gm17764-201ENSMUST00000185925 391 ntBASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Gm6991-201ENSMUST00000218475 1178 ntBASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Gm8806-201ENSMUST00000120076 1407 ntBASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx54Q8K4L0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms