Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cchcr1Q8K2I2 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cchcr1Q8K2I2 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cchcr1Q8K2I2 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cchcr1Q8K2I2 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Cchcr1Q8K2I2 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cchcr1Q8K2I2 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Cchcr1Q8K2I2 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC12.71□□□□□ -0.38
Cchcr1Q8K2I2 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cchcr1Q8K2I2 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Cchcr1Q8K2I2 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cchcr1Q8K2I2 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cchcr1Q8K2I2 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cchcr1Q8K2I2 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cchcr1Q8K2I2 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cchcr1Q8K2I2 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.71□□□□□ -0.38
Cchcr1Q8K2I2 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Gm37242-201ENSMUST00000191873 2085 ntBASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Snord23-201ENSMUST00000116828 109 ntBASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Gm11411-201ENSMUST00000117951 719 ntBASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Gm2875-201ENSMUST00000211333 360 ntBASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cchcr1Q8K2I2 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 AC124581.2-201ENSMUST00000225459 282 ntBASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Gm7589-201ENSMUST00000085631 534 ntBASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Phtf1os-201ENSMUST00000160110 4046 ntBASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cchcr1Q8K2I2 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Gm44103-201ENSMUST00000204364 3662 ntBASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC12.68□□□□□ -0.38
Cchcr1Q8K2I2 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms