Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm10580-201ENSMUST00000097985 396 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm10582-201ENSMUST00000097987 396 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm10583-201ENSMUST00000097988 396 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc17Q8CE13 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Gm9353-201ENSMUST00000200472 604 ntBASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc17Q8CE13 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm23595-201ENSMUST00000104306 130 ntBASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm12418-201ENSMUST00000118116 942 ntBASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm15707-201ENSMUST00000118804 996 ntBASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm16165-201ENSMUST00000160140 795 ntBASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Mir8091-201ENSMUST00000183602 139 ntBASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm19927-201ENSMUST00000185792 781 ntBASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm18001-201ENSMUST00000212023 688 ntBASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc17Q8CE13 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms