Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm25766-201ENSMUST00000104101 131 ntBASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm12337-201ENSMUST00000119634 400 ntBASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm5244-201ENSMUST00000164001 339 ntBASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm17391-201ENSMUST00000171036 126 ntBASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm7467-201ENSMUST00000185173 652 ntBASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm18561-201ENSMUST00000206027 804 ntBASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 CT009601.1-201ENSMUST00000225567 2705 ntBASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc38Q8CDN8 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gm45124-201ENSMUST00000206723 2755 ntBASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gm19013-201ENSMUST00000183895 1222 ntBASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gm19014-201ENSMUST00000184828 1189 ntBASIC12□□□□□ -0.49
Ccdc38Q8CDN8 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gm8436-201ENSMUST00000210152 1080 ntBASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gm5749-201ENSMUST00000210673 1090 ntBASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gm8162-201ENSMUST00000213951 665 ntBASIC12□□□□□ -0.49
Ccdc38Q8CDN8 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 AC154849.4-201ENSMUST00000224868 365 ntBASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gm43052-201ENSMUST00000201451 1628 ntBASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc38Q8CDN8 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc38Q8CDN8 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc38Q8CDN8 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc38Q8CDN8 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.99□□□□□ -0.49
Ccdc38Q8CDN8 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Ccdc38Q8CDN8 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc38Q8CDN8 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms