Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Gm7666-201ENSMUST00000146631 819 ntBASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Gm45398-201ENSMUST00000210561 165 ntBASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Gm38312-201ENSMUST00000195426 1746 ntBASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Gm38199-201ENSMUST00000192013 3277 ntBASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Lysmd4Q8CC84 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 AC160340.2-201ENSMUST00000220812 3675 ntBASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Gm13284-201ENSMUST00000121020 547 ntBASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Gm5599-201ENSMUST00000209602 788 ntBASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Gm1821-202ENSMUST00000227415 750 ntBASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Lysmd4Q8CC84 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 AC156802.2-203ENSMUST00000226032 1906 ntBASIC9.59□□□□□ -0.87
Lysmd4Q8CC84 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms