Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Mir181d-201ENSMUST00000102383 72 ntBASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Gm14231-201ENSMUST00000120090 592 ntBASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Gm4705-201ENSMUST00000177415 354 ntBASIC14.72□□□□□ -0.05
Usp40Q8BWR4 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Gm18182-201ENSMUST00000191380 1251 ntBASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Gm38111-201ENSMUST00000194817 2741 ntBASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Usp40Q8BWR4 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm12337-201ENSMUST00000119634 400 ntBASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm4943-201ENSMUST00000132879 424 ntBASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm44304-201ENSMUST00000200509 145 ntBASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm43811-201ENSMUST00000202862 695 ntBASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm5311-201ENSMUST00000203518 709 ntBASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm7242-201ENSMUST00000221134 705 ntBASIC14.71□□□□□ -0.05
Usp40Q8BWR4 AC133496.1-201ENSMUST00000223891 743 ntBASIC14.71□□□□□ -0.05
Usp40Q8BWR4 AC154436.1-201ENSMUST00000227272 782 ntBASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Gm22341-201ENSMUST00000083775 129 ntBASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Usp40Q8BWR4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Usp40Q8BWR4 Gm10537-201ENSMUST00000192625 1698 ntBASIC14.71□□□□□ -0.06
Usp40Q8BWR4 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Gm22751-201ENSMUST00000102077 109 ntBASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Mir692-3-201ENSMUST00000102079 109 ntBASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Mir692-2-201ENSMUST00000102081 109 ntBASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Gm15554-201ENSMUST00000120406 913 ntBASIC14.7□□□□□ -0.06
Usp40Q8BWR4 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Gm29157-201ENSMUST00000188753 612 ntBASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Gm8525-201ENSMUST00000189674 861 ntBASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Gm33707-201ENSMUST00000195135 569 ntBASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Gm19566-201ENSMUST00000199576 610 ntBASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Usp40Q8BWR4 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms