Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm42587-201ENSMUST00000198462 1981 ntBASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm14034-201ENSMUST00000120147 551 ntBASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm26532-201ENSMUST00000180630 690 ntBASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm29304-201ENSMUST00000186555 695 ntBASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm29223-201ENSMUST00000188867 695 ntBASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm29487-201ENSMUST00000190146 256 ntBASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm37921-201ENSMUST00000194333 695 ntBASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gm5881-201ENSMUST00000204737 367 ntBASIC12.48□□□□□ -0.41
Nup98Q6PFD9 AC118639.1-202ENSMUST00000226957 653 ntBASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup98Q6PFD9 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC12.47□□□□□ -0.41
Nup98Q6PFD9 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Gm23432-201ENSMUST00000157181 131 ntBASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Gm24352-201ENSMUST00000158966 125 ntBASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Gm18164-201ENSMUST00000213769 927 ntBASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Gm18166-201ENSMUST00000215557 927 ntBASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup98Q6PFD9 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Vgll3-202ENSMUST00000227997 1383 ntBASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Gm42974-201ENSMUST00000199556 2654 ntBASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Gm15132-201ENSMUST00000118581 652 ntBASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup98Q6PFD9 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup98Q6PFD9 Gm15602-201ENSMUST00000116162 465 ntBASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms