Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.17□□□□□ -0.14
Gli3Q61602 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gli3Q61602 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Gm15423-201ENSMUST00000150600 1430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Gli3Q61602 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC14.17□□□□□ -0.14
Gli3Q61602 Ly6g6e-202ENSMUST00000172494 464 ntTSL 3 BASIC14.17□□□□□ -0.14
Gli3Q61602 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC14.17□□□□□ -0.14
Gli3Q61602 Gm8083-201ENSMUST00000203976 475 ntBASIC14.17□□□□□ -0.14
Gli3Q61602 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC14.17□□□□□ -0.14
Gli3Q61602 AC100406.1-201ENSMUST00000217305 480 ntBASIC14.17□□□□□ -0.14
Gli3Q61602 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC14.17□□□□□ -0.14
Gli3Q61602 Gm826-201ENSMUST00000099127 637 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC14.17□□□□□ -0.14
Gli3Q61602 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gli3Q61602 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC14.16□□□□□ -0.14
Gli3Q61602 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Gli3Q61602 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.16□□□□□ -0.14
Gli3Q61602 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Gm14705-201ENSMUST00000154109 1824 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 4933436P19Rik-201ENSMUST00000217736 1442 ntBASIC14.16□□□□□ -0.14
Gli3Q61602 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gli3Q61602 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Gm6341-201ENSMUST00000119683 411 ntBASIC14.16□□□□□ -0.14
Gli3Q61602 Gm10639-202ENSMUST00000121273 873 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Gm15499-201ENSMUST00000141390 422 ntTSL 5 BASIC14.16□□□□□ -0.14
Gli3Q61602 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC14.16□□□□□ -0.14
Gli3Q61602 Gm24074-201ENSMUST00000158178 260 ntBASIC14.16□□□□□ -0.14
Gli3Q61602 Mir6360-201ENSMUST00000184278 126 ntBASIC14.16□□□□□ -0.14
Gli3Q61602 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC14.16□□□□□ -0.14
Gli3Q61602 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC14.16□□□□□ -0.14
Gli3Q61602 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gli3Q61602 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC14.16□□□□□ -0.14
Gli3Q61602 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Gm9260-201ENSMUST00000199781 1380 ntBASIC14.16□□□□□ -0.14
Gli3Q61602 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Gm43290-201ENSMUST00000200359 1557 ntBASIC14.16□□□□□ -0.14
Gli3Q61602 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Gli3Q61602 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gli3Q61602 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Gli3Q61602 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gli3Q61602 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gli3Q61602 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gli3Q61602 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Erich3-203ENSMUST00000189969 3460 ntBASIC14.15□□□□□ -0.14
Gli3Q61602 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gli3Q61602 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Zfp410-208ENSMUST00000222258 2329 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC14.15□□□□□ -0.14
Gli3Q61602 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Gm11888-201ENSMUST00000120471 810 ntBASIC14.15□□□□□ -0.14
Gli3Q61602 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gli3Q61602 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC14.15□□□□□ -0.14
Gli3Q61602 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC14.15□□□□□ -0.14
Gli3Q61602 Gm6773-201ENSMUST00000182377 878 ntBASIC14.15□□□□□ -0.14
Gli3Q61602 Gm37118-201ENSMUST00000194328 406 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms