Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Gm18443-201ENSMUST00000185358 556 ntBASIC13.51□□□□□ -0.25
Smarcc1P97496 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC13.51□□□□□ -0.25
Smarcc1P97496 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.51□□□□□ -0.25
Smarcc1P97496 Gm8828-201ENSMUST00000196786 1290 ntBASIC13.51□□□□□ -0.25
Smarcc1P97496 Gm40332-201ENSMUST00000199847 938 ntBASIC13.51□□□□□ -0.25
Smarcc1P97496 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC13.51□□□□□ -0.25
Smarcc1P97496 Gm8557-201ENSMUST00000220777 475 ntBASIC13.51□□□□□ -0.25
Smarcc1P97496 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc1P97496 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.51□□□□□ -0.25
Smarcc1P97496 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC13.5□□□□□ -0.25
Smarcc1P97496 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.5□□□□□ -0.25
Smarcc1P97496 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC13.5□□□□□ -0.25
Smarcc1P97496 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.5□□□□□ -0.25
Smarcc1P97496 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC13.5□□□□□ -0.25
Smarcc1P97496 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC13.5□□□□□ -0.25
Smarcc1P97496 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC13.5□□□□□ -0.25
Smarcc1P97496 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Gm18862-201ENSMUST00000204643 933 ntBASIC13.5□□□□□ -0.25
Smarcc1P97496 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC13.5□□□□□ -0.25
Smarcc1P97496 AC154461.3-201ENSMUST00000224831 573 ntBASIC13.5□□□□□ -0.25
Smarcc1P97496 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Smarcc1P97496 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Smarcc1P97496 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smarcc1P97496 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm13169-201ENSMUST00000122090 1459 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm14571-201ENSMUST00000118292 570 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm11544-201ENSMUST00000120215 382 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm26957-201ENSMUST00000182645 977 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm18552-201ENSMUST00000187425 538 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm5302-201ENSMUST00000202130 796 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 AC165260.2-201ENSMUST00000225371 395 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Mir194-2-201ENSMUST00000083648 86 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Gm10617-201ENSMUST00000098368 1172 ntBASIC13.49□□□□□ -0.25
Smarcc1P97496 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcc1P97496 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smarcc1P97496 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms