Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm15707-201ENSMUST00000118804 996 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 Gng5-ps-201ENSMUST00000120931 205 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 Gm6238-201ENSMUST00000120999 465 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm23582-201ENSMUST00000158530 139 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC8.69□□□□□ -1.02
Lmo4P61969 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm18182-201ENSMUST00000191380 1251 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 Gm43752-201ENSMUST00000198475 697 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC8.69□□□□□ -1.02
Lmo4P61969 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC8.69□□□□□ -1.02
Lmo4P61969 AC154431.1-201ENSMUST00000224910 880 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 AC105408.1-201ENSMUST00000227771 802 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Lmo4P61969 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm4865-201ENSMUST00000196284 1309 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 Gm45677-201ENSMUST00000209975 1341 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Lmo4P61969 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm13120-201ENSMUST00000117343 1446 ntBASIC8.69□□□□□ -1.02
Lmo4P61969 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Lmo4P61969 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Lmo4P61969 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Lmo4P61969 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Lmo4P61969 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC8.68□□□□□ -1.02
Lmo4P61969 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
Lmo4P61969 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Lmo4P61969 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm43622-201ENSMUST00000200140 2019 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC8.68□□□□□ -1.02
Lmo4P61969 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Lmo4P61969 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC8.68□□□□□ -1.02
Lmo4P61969 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm23439-201ENSMUST00000104292 132 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Snora68-201ENSMUST00000104375 131 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC8.68□□□□□ -1.02
Lmo4P61969 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm8482-201ENSMUST00000117972 471 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm13841-201ENSMUST00000118829 483 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Gm11449-201ENSMUST00000119175 476 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Gm11573-201ENSMUST00000119956 394 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Lmo4P61969 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Gm8210-201ENSMUST00000178557 483 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Gm15454-201ENSMUST00000179718 483 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Uba52-ps-201ENSMUST00000183770 379 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm8918-201ENSMUST00000190587 1087 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Gm37944-201ENSMUST00000194233 414 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm44304-201ENSMUST00000200509 145 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Gm42689-201ENSMUST00000202403 404 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm18123-201ENSMUST00000210874 822 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm18122-201ENSMUST00000211390 904 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC8.68□□□□□ -1.02
Lmo4P61969 Gm4930-201ENSMUST00000219926 1087 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Gm8557-201ENSMUST00000220777 475 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC8.68□□□□□ -1.02
Lmo4P61969 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Lmo4P61969 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms