Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm11573-201ENSMUST00000119956 394 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 Gm24140-201ENSMUST00000122773 326 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.97□□□□□ -0.65
Ddx6P54823 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC10.97□□□□□ -0.65
Ddx6P54823 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC10.97□□□□□ -0.65
Ddx6P54823 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm27441-201ENSMUST00000185000 105 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 Gm28746-201ENSMUST00000187453 380 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm37688-201ENSMUST00000195195 465 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 Gm43752-201ENSMUST00000198475 697 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.97□□□□□ -0.65
Ddx6P54823 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm45893-201ENSMUST00000211899 247 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ddx6P54823 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ddx6P54823 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm4865-201ENSMUST00000196284 1309 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ddx6P54823 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ddx6P54823 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ddx6P54823 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.97□□□□□ -0.65
Ddx6P54823 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ddx6P54823 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ddx6P54823 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ddx6P54823 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ddx6P54823 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.96□□□□□ -0.65
Ddx6P54823 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC10.96□□□□□ -0.65
Ddx6P54823 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.96□□□□□ -0.65
Ddx6P54823 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.96□□□□□ -0.65
Ddx6P54823 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.96□□□□□ -0.65
Ddx6P54823 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC10.96□□□□□ -0.65
Ddx6P54823 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.96□□□□□ -0.65
Ddx6P54823 Gm8625-201ENSMUST00000194185 1077 ntBASIC10.96□□□□□ -0.65
Ddx6P54823 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC10.96□□□□□ -0.65
Ddx6P54823 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ddx6P54823 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC10.96□□□□□ -0.65
Ddx6P54823 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ddx6P54823 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ddx6P54823 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ddx6P54823 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.96□□□□□ -0.66
Ddx6P54823 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ddx6P54823 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Ddx6P54823 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ddx6P54823 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ddx6P54823 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ddx6P54823 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.96□□□□□ -0.66
Ddx6P54823 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ddx6P54823 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ddx6P54823 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ddx6P54823 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ddx6P54823 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ddx6P54823 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 181 ms