Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC10.26□□□□□ -0.77
Cdx2P43241 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx2P43241 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC10.26□□□□□ -0.77
Cdx2P43241 Klf10-203ENSMUST00000227920 2144 ntBASIC10.26□□□□□ -0.77
Cdx2P43241 AC141884.2-201ENSMUST00000228811 775 ntBASIC10.26□□□□□ -0.77
Cdx2P43241 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx2P43241 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Cdx2P43241 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx2P43241 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx2P43241 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx2P43241 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx2P43241 Gm8968-201ENSMUST00000199133 1303 ntBASIC10.26□□□□□ -0.77
Cdx2P43241 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx2P43241 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx2P43241 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.26□□□□□ -0.77
Cdx2P43241 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cdx2P43241 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cdx2P43241 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cdx2P43241 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cdx2P43241 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC10.25□□□□□ -0.77
Cdx2P43241 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cdx2P43241 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cdx2P43241 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cdx2P43241 Gm11540-201ENSMUST00000117457 780 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 Gm14829-201ENSMUST00000121499 1138 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Gm5801-201ENSMUST00000182247 780 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC10.25□□□□□ -0.77
Cdx2P43241 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC10.25□□□□□ -0.77
Cdx2P43241 Gm9409-201ENSMUST00000197017 316 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 Gm44908-201ENSMUST00000208610 266 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 Gm44917-201ENSMUST00000208798 520 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 AC124356.1-201ENSMUST00000221469 698 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC10.25□□□□□ -0.77
Cdx2P43241 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.25□□□□□ -0.77
Cdx2P43241 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.25□□□□□ -0.77
Cdx2P43241 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cdx2P43241 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdx2P43241 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Gm42521-201ENSMUST00000199190 2040 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cdx2P43241 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.24□□□□□ -0.77
Cdx2P43241 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cdx2P43241 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC10.24□□□□□ -0.77
Cdx2P43241 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 Gm11544-201ENSMUST00000120215 382 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 Gm13624-201ENSMUST00000120263 462 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.24□□□□□ -0.77
Cdx2P43241 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdx2P43241 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Cdx2P43241 Gm18466-201ENSMUST00000209147 499 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 Gm2716-201ENSMUST00000212350 643 ntBASIC10.24□□□□□ -0.77
Cdx2P43241 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC10.24□□□□□ -0.77
Cdx2P43241 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC10.24□□□□□ -0.77
Cdx2P43241 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms