Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Gm37583-201ENSMUST00000195460 2487 ntBASIC13.19□□□□□ -0.3
Nkx1-2P42580 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC13.19□□□□□ -0.3
Nkx1-2P42580 AC154220.1-201ENSMUST00000225033 1705 ntBASIC13.19□□□□□ -0.3
Nkx1-2P42580 Gm26670-201ENSMUST00000180429 3287 ntBASIC13.19□□□□□ -0.3
Nkx1-2P42580 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Nkx1-2P42580 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm11952-201ENSMUST00000121172 821 ntBASIC13.18□□□□□ -0.3
Nkx1-2P42580 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm26461-201ENSMUST00000175064 290 ntBASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.18□□□□□ -0.3
Nkx1-2P42580 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm19091-201ENSMUST00000208120 978 ntBASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.18□□□□□ -0.3
Nkx1-2P42580 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Snora73b-201ENSMUST00000083419 205 ntBASIC13.18□□□□□ -0.3
Nkx1-2P42580 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 AC126459.1-201ENSMUST00000214791 2123 ntBASIC13.18□□□□□ -0.3
Nkx1-2P42580 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx1-2P42580 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Gm13104-201ENSMUST00000119651 1446 ntBASIC13.17□□□□□ -0.3
Nkx1-2P42580 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.17□□□□□ -0.3
Nkx1-2P42580 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Gm17391-201ENSMUST00000171036 126 ntBASIC13.17□□□□□ -0.3
Nkx1-2P42580 Gm27953-201ENSMUST00000185171 143 ntBASIC13.17□□□□□ -0.3
Nkx1-2P42580 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx1-2P42580 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Gm37697-201ENSMUST00000195680 1844 ntBASIC13.17□□□□□ -0.3
Nkx1-2P42580 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Gm38199-201ENSMUST00000192013 3277 ntBASIC13.17□□□□□ -0.3
Nkx1-2P42580 Gm4454-201ENSMUST00000190585 2578 ntBASIC13.17□□□□□ -0.3
Nkx1-2P42580 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Nkx1-2P42580 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms