Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm40414-201ENSMUST00000197608 481 ntBASIC8.82□□□□□ -1
VhlP40338 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
VhlP40338 Gm44420-201ENSMUST00000203669 490 ntBASIC8.82□□□□□ -1
VhlP40338 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Gm44551-201ENSMUST00000208804 171 ntBASIC8.82□□□□□ -1
VhlP40338 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
VhlP40338 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC8.82□□□□□ -1
VhlP40338 CT009713.8-201ENSMUST00000225448 560 ntBASIC8.82□□□□□ -1
VhlP40338 Gm5468-202ENSMUST00000227851 682 ntBASIC8.82□□□□□ -1
VhlP40338 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
VhlP40338 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Gm37516-201ENSMUST00000192593 1954 ntBASIC8.82□□□□□ -1
VhlP40338 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Gm6580-201ENSMUST00000117504 1357 ntBASIC8.82□□□□□ -1
VhlP40338 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
VhlP40338 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC8.82□□□□□ -1
VhlP40338 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
VhlP40338 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
VhlP40338 AC154352.1-201ENSMUST00000221477 2365 ntBASIC8.81□□□□□ -1
VhlP40338 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
VhlP40338 Gm7405-201ENSMUST00000121476 1337 ntBASIC8.81□□□□□ -1
VhlP40338 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
VhlP40338 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
VhlP40338 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Gm9220-201ENSMUST00000190721 2544 ntBASIC8.81□□□□□ -1
VhlP40338 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC8.81□□□□□ -1
VhlP40338 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC8.81□□□□□ -1
VhlP40338 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC8.81□□□□□ -1
VhlP40338 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC8.81□□□□□ -1
VhlP40338 Gm14028-201ENSMUST00000117434 479 ntBASIC8.81□□□□□ -1
VhlP40338 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC8.81□□□□□ -1
VhlP40338 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
VhlP40338 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC8.81□□□□□ -1
VhlP40338 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Gm28450-201ENSMUST00000187349 638 ntBASIC8.81□□□□□ -1
VhlP40338 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC8.81□□□□□ -1
VhlP40338 Gm44155-201ENSMUST00000203923 412 ntBASIC8.81□□□□□ -1
VhlP40338 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC8.81□□□□□ -1
VhlP40338 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC8.81□□□□□ -1
VhlP40338 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC8.81□□□□□ -1
VhlP40338 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 AC124561.1-202ENSMUST00000228652 1929 ntBASIC8.81□□□□□ -1
VhlP40338 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Gm16478-201ENSMUST00000208113 5084 ntBASIC8.81□□□□□ -1
VhlP40338 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC8.81□□□□□ -1
VhlP40338 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Gm45867-201ENSMUST00000208201 2317 ntBASIC8.81□□□□□ -1
VhlP40338 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
VhlP40338 Gm21358-201ENSMUST00000191645 1659 ntBASIC8.81□□□□□ -1
VhlP40338 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
VhlP40338 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC8.81□□□□□ -1
VhlP40338 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC8.8□□□□□ -1
VhlP40338 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC8.8□□□□□ -1
VhlP40338 Gm13104-201ENSMUST00000119651 1446 ntBASIC8.8□□□□□ -1
VhlP40338 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 CU062626.3-201ENSMUST00000225522 1411 ntBASIC8.8□□□□□ -1
VhlP40338 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC8.8□□□□□ -1
VhlP40338 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC8.8□□□□□ -1
VhlP40338 Gm13126-201ENSMUST00000117079 3063 ntBASIC8.8□□□□□ -1
VhlP40338 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms