Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
BrafP28028 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.54□□□□□ -0.72
BrafP28028 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.54□□□□□ -0.72
BrafP28028 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.54□□□□□ -0.72
BrafP28028 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.54□□□□□ -0.72
BrafP28028 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.54□□□□□ -0.72
BrafP28028 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.54□□□□□ -0.72
BrafP28028 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.54□□□□□ -0.72
BrafP28028 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
BrafP28028 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.54□□□□□ -0.72
BrafP28028 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
BrafP28028 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
BrafP28028 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 Gm37905-201ENSMUST00000195310 341 ntBASIC10.54□□□□□ -0.72
BrafP28028 Gm44980-201ENSMUST00000205826 314 ntBASIC10.54□□□□□ -0.72
BrafP28028 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.54□□□□□ -0.72
BrafP28028 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 AA474408-201ENSMUST00000098110 3339 ntBASIC10.54□□□□□ -0.72
BrafP28028 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC10.54□□□□□ -0.72
BrafP28028 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
BrafP28028 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
BrafP28028 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
BrafP28028 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
BrafP28028 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC10.53□□□□□ -0.72
BrafP28028 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
BrafP28028 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
BrafP28028 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
BrafP28028 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.53□□□□□ -0.72
BrafP28028 Gm11573-201ENSMUST00000119956 394 ntBASIC10.53□□□□□ -0.72
BrafP28028 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.53□□□□□ -0.72
BrafP28028 Gm42997-202ENSMUST00000200321 985 ntBASIC10.53□□□□□ -0.72
BrafP28028 Gm5302-201ENSMUST00000202130 796 ntBASIC10.53□□□□□ -0.72
BrafP28028 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Gm8959-201ENSMUST00000213150 571 ntBASIC10.53□□□□□ -0.72
BrafP28028 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.53□□□□□ -0.72
BrafP28028 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.53□□□□□ -0.72
BrafP28028 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
BrafP28028 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.53□□□□□ -0.72
BrafP28028 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
BrafP28028 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
BrafP28028 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 AC154352.1-201ENSMUST00000221477 2365 ntBASIC10.53□□□□□ -0.72
BrafP28028 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC10.53□□□□□ -0.72
BrafP28028 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.53□□□□□ -0.72
BrafP28028 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
BrafP28028 Gm7357-201ENSMUST00000195361 2991 ntBASIC10.53□□□□□ -0.72
BrafP28028 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.53□□□□□ -0.72
BrafP28028 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
BrafP28028 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.52□□□□□ -0.72
BrafP28028 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
BrafP28028 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
BrafP28028 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
BrafP28028 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
BrafP28028 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
BrafP28028 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
BrafP28028 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
BrafP28028 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
BrafP28028 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
BrafP28028 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.52□□□□□ -0.73
BrafP28028 Gm37003-201ENSMUST00000194702 2827 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms