Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
UbbP0CG49 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UbbP0CG49 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
UbbP0CG49 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.34□□□□□ -0.91
UbbP0CG49 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
UbbP0CG49 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
UbbP0CG49 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
UbbP0CG49 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.34□□□□□ -0.91
UbbP0CG49 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm15352-201ENSMUST00000118696 270 ntBASIC9.34□□□□□ -0.91
UbbP0CG49 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm27552-201ENSMUST00000183351 62 ntBASIC9.34□□□□□ -0.91
UbbP0CG49 Gm27844-201ENSMUST00000183613 62 ntBASIC9.34□□□□□ -0.91
UbbP0CG49 Gm10774-201ENSMUST00000188689 204 ntBASIC9.34□□□□□ -0.91
UbbP0CG49 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm5369-201ENSMUST00000217499 588 ntBASIC9.34□□□□□ -0.91
UbbP0CG49 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.34□□□□□ -0.91
UbbP0CG49 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.34□□□□□ -0.91
UbbP0CG49 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm43633-201ENSMUST00000202455 2330 ntBASIC9.34□□□□□ -0.91
UbbP0CG49 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
UbbP0CG49 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
UbbP0CG49 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.34□□□□□ -0.91
UbbP0CG49 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
UbbP0CG49 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
UbbP0CG49 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.34□□□□□ -0.91
UbbP0CG49 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
UbbP0CG49 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.34□□□□□ -0.91
UbbP0CG49 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
UbbP0CG49 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.34□□□□□ -0.92
UbbP0CG49 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 AC158779.1-201ENSMUST00000228912 3861 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms