Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Gm3961-201ENSMUST00000204425 994 ntBASIC8.95□□□□□ -0.98
CfdP03953 Gm44262-201ENSMUST00000204969 372 ntBASIC8.95□□□□□ -0.98
CfdP03953 Gm44506-201ENSMUST00000206278 965 ntBASIC8.95□□□□□ -0.98
CfdP03953 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC8.95□□□□□ -0.98
CfdP03953 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Gm7319-201ENSMUST00000210047 778 ntBASIC8.95□□□□□ -0.98
CfdP03953 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC8.95□□□□□ -0.98
CfdP03953 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC8.95□□□□□ -0.98
CfdP03953 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Gm10020-201ENSMUST00000081993 612 ntBASIC8.95□□□□□ -0.98
CfdP03953 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 AC090962.2-201ENSMUST00000225064 1801 ntBASIC8.95□□□□□ -0.98
CfdP03953 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Crry-ps-201ENSMUST00000079090 1309 ntBASIC8.95□□□□□ -0.98
CfdP03953 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
CfdP03953 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Gm29101-201ENSMUST00000188329 1471 ntBASIC8.95□□□□□ -0.98
CfdP03953 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC8.95□□□□□ -0.98
CfdP03953 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CfdP03953 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC8.95□□□□□ -0.98
CfdP03953 Rad51d-201ENSMUST00000018985 3426 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CfdP03953 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
CfdP03953 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Grik1-211ENSMUST00000228188 3221 ntBASIC8.94□□□□□ -0.98
CfdP03953 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC8.94□□□□□ -0.98
CfdP03953 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Gm37671-201ENSMUST00000193198 2096 ntBASIC8.94□□□□□ -0.98
CfdP03953 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
CfdP03953 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
CfdP03953 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Gm12957-201ENSMUST00000117835 377 ntBASIC8.94□□□□□ -0.98
CfdP03953 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC8.94□□□□□ -0.98
CfdP03953 Gm12012-201ENSMUST00000118857 1066 ntBASIC8.94□□□□□ -0.98
CfdP03953 Gm15595-201ENSMUST00000120840 961 ntBASIC8.94□□□□□ -0.98
CfdP03953 Gm15566-201ENSMUST00000121130 590 ntBASIC8.94□□□□□ -0.98
CfdP03953 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC8.94□□□□□ -0.98
CfdP03953 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Gm18367-201ENSMUST00000176139 600 ntBASIC8.94□□□□□ -0.98
CfdP03953 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 Mir7051-201ENSMUST00000184167 73 ntBASIC8.94□□□□□ -0.98
CfdP03953 Gm5733-201ENSMUST00000190232 939 ntBASIC8.94□□□□□ -0.98
CfdP03953 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC8.94□□□□□ -0.98
CfdP03953 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC8.94□□□□□ -0.98
CfdP03953 Gm43186-201ENSMUST00000198130 824 ntBASIC8.94□□□□□ -0.98
CfdP03953 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC8.94□□□□□ -0.98
CfdP03953 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 AC154276.3-201ENSMUST00000227643 998 ntBASIC8.94□□□□□ -0.98
CfdP03953 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Gm9785-201ENSMUST00000062642 1006 ntBASIC8.94□□□□□ -0.98
CfdP03953 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Gm42979-201ENSMUST00000196287 2228 ntBASIC8.94□□□□□ -0.98
CfdP03953 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
CfdP03953 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CfdP03953 Gm7061-201ENSMUST00000118127 1416 ntBASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms