Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC11.05□□□□□ -0.64
CopeO89079 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CopeO89079 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.04□□□□□ -0.64
CopeO89079 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.04□□□□□ -0.64
CopeO89079 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CopeO89079 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.04□□□□□ -0.64
CopeO89079 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CopeO89079 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.04□□□□□ -0.64
CopeO89079 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Gm11411-201ENSMUST00000117951 719 ntBASIC11.04□□□□□ -0.64
CopeO89079 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.04□□□□□ -0.64
CopeO89079 Gm13284-201ENSMUST00000121020 547 ntBASIC11.04□□□□□ -0.64
CopeO89079 Gm8737-201ENSMUST00000122208 642 ntBASIC11.04□□□□□ -0.64
CopeO89079 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.04□□□□□ -0.64
CopeO89079 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC11.04□□□□□ -0.64
CopeO89079 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.04□□□□□ -0.64
CopeO89079 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CopeO89079 Gm21092-201ENSMUST00000178995 955 ntBASIC11.04□□□□□ -0.64
CopeO89079 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CopeO89079 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.04□□□□□ -0.64
CopeO89079 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.04□□□□□ -0.64
CopeO89079 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.04□□□□□ -0.64
CopeO89079 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.04□□□□□ -0.64
CopeO89079 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.04□□□□□ -0.64
CopeO89079 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CopeO89079 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.04□□□□□ -0.64
CopeO89079 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CopeO89079 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC11.04□□□□□ -0.64
CopeO89079 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.04□□□□□ -0.64
CopeO89079 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CopeO89079 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CopeO89079 Gm37567-201ENSMUST00000193241 2279 ntBASIC11.04□□□□□ -0.64
CopeO89079 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CopeO89079 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC11.03□□□□□ -0.64
CopeO89079 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CopeO89079 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CopeO89079 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.03□□□□□ -0.64
CopeO89079 Gm15554-201ENSMUST00000120406 913 ntBASIC11.03□□□□□ -0.64
CopeO89079 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.03□□□□□ -0.64
CopeO89079 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.03□□□□□ -0.64
CopeO89079 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CopeO89079 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.03□□□□□ -0.64
CopeO89079 Gm2383-201ENSMUST00000181461 807 ntBASIC11.03□□□□□ -0.64
CopeO89079 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.03□□□□□ -0.64
CopeO89079 Mir7686-201ENSMUST00000200604 57 ntBASIC11.03□□□□□ -0.64
CopeO89079 Gm18466-201ENSMUST00000209147 499 ntBASIC11.03□□□□□ -0.64
CopeO89079 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
CopeO89079 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.03□□□□□ -0.64
CopeO89079 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.03□□□□□ -0.64
CopeO89079 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CopeO89079 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CopeO89079 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CopeO89079 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.03□□□□□ -0.64
CopeO89079 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CopeO89079 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.03□□□□□ -0.64
CopeO89079 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms