Protein–RNA interactions for Protein: J3QJW5

Cldn34c3, Claudin 34C3, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34c3J3QJW5 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm9387-201ENSMUST00000098624 1320 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm4900-201ENSMUST00000222046 1628 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm25076-201ENSMUST00000104098 132 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm4909-201ENSMUST00000118749 794 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm4917-201ENSMUST00000121452 650 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm23045-201ENSMUST00000175041 96 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm21092-201ENSMUST00000178995 955 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Platr10-202ENSMUST00000191479 818 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm31941-201ENSMUST00000209689 350 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Mt1-202ENSMUST00000211807 1085 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 CT010506.1-201ENSMUST00000223673 349 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 AC131330.1-201ENSMUST00000227814 1015 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm11735-201ENSMUST00000106377 1581 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 AC113441.2-201ENSMUST00000221538 1468 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm45089-201ENSMUST00000208082 2040 ntBASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cldn34c3J3QJW5 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gm28624-201ENSMUST00000186430 2131 ntBASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Mir6546-201ENSMUST00000184460 62 ntBASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gm37458-201ENSMUST00000194055 410 ntBASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gm5865-201ENSMUST00000198713 637 ntBASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gm45398-201ENSMUST00000210561 165 ntBASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gm7742-201ENSMUST00000167648 1527 ntBASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gm7732-201ENSMUST00000170486 1527 ntBASIC8.62□□□□□ -1.03
Cldn34c3J3QJW5 Gm7740-201ENSMUST00000186171 1527 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms