Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcb1Q9Z0H3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcb1Q9Z0H3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcb1Q9Z0H3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcb1Q9Z0H3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcb1Q9Z0H3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcb1Q9Z0H3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.85■□□□□ 0.93
Smarcb1Q9Z0H3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Smarcb1Q9Z0H3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcb1Q9Z0H3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smarcb1Q9Z0H3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcb1Q9Z0H3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Smarcb1Q9Z0H3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcb1Q9Z0H3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcb1Q9Z0H3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.84■□□□□ 0.93
Smarcb1Q9Z0H3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.84■□□□□ 0.93
Smarcb1Q9Z0H3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcb1Q9Z0H3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Smarcb1Q9Z0H3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smarcb1Q9Z0H3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcb1Q9Z0H3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
Smarcb1Q9Z0H3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcb1Q9Z0H3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcb1Q9Z0H3 Gm11421-201ENSMUST00000122124 294 ntBASIC20.83■□□□□ 0.93
Smarcb1Q9Z0H3 Gm5874-201ENSMUST00000096101 508 ntBASIC20.83■□□□□ 0.93
Smarcb1Q9Z0H3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smarcb1Q9Z0H3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.83■□□□□ 0.92
Smarcb1Q9Z0H3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcb1Q9Z0H3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.82■□□□□ 0.92
Smarcb1Q9Z0H3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcb1Q9Z0H3 Gm40848-201ENSMUST00000221998 324 ntBASIC20.82■□□□□ 0.92
Smarcb1Q9Z0H3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
Smarcb1Q9Z0H3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcb1Q9Z0H3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smarcb1Q9Z0H3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Gm10493-201ENSMUST00000097270 612 ntBASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Smarcb1Q9Z0H3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcb1Q9Z0H3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcb1Q9Z0H3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.8■□□□□ 0.92
Smarcb1Q9Z0H3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcb1Q9Z0H3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smarcb1Q9Z0H3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smarcb1Q9Z0H3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcb1Q9Z0H3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.79■□□□□ 0.92
Smarcb1Q9Z0H3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Smarcb1Q9Z0H3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smarcb1Q9Z0H3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcb1Q9Z0H3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcb1Q9Z0H3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.78■□□□□ 0.92
Smarcb1Q9Z0H3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcb1Q9Z0H3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Smarcb1Q9Z0H3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smarcb1Q9Z0H3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.78■□□□□ 0.92
Smarcb1Q9Z0H3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Smarcb1Q9Z0H3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcb1Q9Z0H3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Smarcb1Q9Z0H3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smarcb1Q9Z0H3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
Smarcb1Q9Z0H3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smarcb1Q9Z0H3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smarcb1Q9Z0H3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.75■□□□□ 0.91
Smarcb1Q9Z0H3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.75■□□□□ 0.91
Smarcb1Q9Z0H3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcb1Q9Z0H3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcb1Q9Z0H3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcb1Q9Z0H3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarcb1Q9Z0H3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarcb1Q9Z0H3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms