Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn5Q9WVD4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn5Q9WVD4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn5Q9WVD4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn5Q9WVD4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn5Q9WVD4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn5Q9WVD4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn5Q9WVD4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn5Q9WVD4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn5Q9WVD4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.73■□□□□ 0.91
Clcn5Q9WVD4 Gm7143-201ENSMUST00000222811 859 ntBASIC20.73■□□□□ 0.91
Clcn5Q9WVD4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcn5Q9WVD4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Clcn5Q9WVD4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Clcn5Q9WVD4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn5Q9WVD4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn5Q9WVD4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn5Q9WVD4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcn5Q9WVD4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn5Q9WVD4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn5Q9WVD4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn5Q9WVD4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn5Q9WVD4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn5Q9WVD4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn5Q9WVD4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn5Q9WVD4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcn5Q9WVD4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn5Q9WVD4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Clcn5Q9WVD4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.7■□□□□ 0.9
Clcn5Q9WVD4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.7■□□□□ 0.9
Clcn5Q9WVD4 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.7■□□□□ 0.9
Clcn5Q9WVD4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn5Q9WVD4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
Clcn5Q9WVD4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcn5Q9WVD4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Clcn5Q9WVD4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn5Q9WVD4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Clcn5Q9WVD4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn5Q9WVD4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn5Q9WVD4 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.69■□□□□ 0.9
Clcn5Q9WVD4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clcn5Q9WVD4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.69■□□□□ 0.9
Clcn5Q9WVD4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Clcn5Q9WVD4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcn5Q9WVD4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 AV356131-201ENSMUST00000206201 750 ntBASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcn5Q9WVD4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn5Q9WVD4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.66■□□□□ 0.9
Clcn5Q9WVD4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Clcn5Q9WVD4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Clcn5Q9WVD4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Clcn5Q9WVD4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.66■□□□□ 0.9
Clcn5Q9WVD4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn5Q9WVD4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
Clcn5Q9WVD4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
Clcn5Q9WVD4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn5Q9WVD4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcn5Q9WVD4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Gm40848-201ENSMUST00000221998 324 ntBASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn5Q9WVD4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Clcn5Q9WVD4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clcn5Q9WVD4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn5Q9WVD4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn5Q9WVD4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn5Q9WVD4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.64■□□□□ 0.89
Clcn5Q9WVD4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.64■□□□□ 0.89
Clcn5Q9WVD4 Gm10033-202ENSMUST00000211874 928 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms