Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.39■□□□□ 0.85
Scn8aQ9WTU3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Scn8aQ9WTU3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn8aQ9WTU3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn8aQ9WTU3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scn8aQ9WTU3 Gm26833-201ENSMUST00000180899 440 ntBASIC20.38■□□□□ 0.85
Scn8aQ9WTU3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Scn8aQ9WTU3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn8aQ9WTU3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.38■□□□□ 0.85
Scn8aQ9WTU3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Gm40848-201ENSMUST00000221998 324 ntBASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn8aQ9WTU3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn8aQ9WTU3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Scn8aQ9WTU3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn8aQ9WTU3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.36■□□□□ 0.85
Scn8aQ9WTU3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn8aQ9WTU3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn8aQ9WTU3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn8aQ9WTU3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn8aQ9WTU3 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn8aQ9WTU3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.34■□□□□ 0.85
Scn8aQ9WTU3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn8aQ9WTU3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.33■□□□□ 0.85
Scn8aQ9WTU3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scn8aQ9WTU3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn8aQ9WTU3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.33■□□□□ 0.84
Scn8aQ9WTU3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn8aQ9WTU3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn8aQ9WTU3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn8aQ9WTU3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Scn8aQ9WTU3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn8aQ9WTU3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn8aQ9WTU3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.32■□□□□ 0.84
Scn8aQ9WTU3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn8aQ9WTU3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn8aQ9WTU3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn8aQ9WTU3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Scn8aQ9WTU3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Scn8aQ9WTU3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.31■□□□□ 0.84
Scn8aQ9WTU3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn8aQ9WTU3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn8aQ9WTU3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn8aQ9WTU3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.31■□□□□ 0.84
Scn8aQ9WTU3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Scn8aQ9WTU3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Scn8aQ9WTU3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn8aQ9WTU3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Scn8aQ9WTU3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn8aQ9WTU3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scn8aQ9WTU3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn8aQ9WTU3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn8aQ9WTU3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scn8aQ9WTU3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn8aQ9WTU3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Scn8aQ9WTU3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn8aQ9WTU3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.29■□□□□ 0.84
Scn8aQ9WTU3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Scn8aQ9WTU3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.29■□□□□ 0.84
Scn8aQ9WTU3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn8aQ9WTU3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Scn8aQ9WTU3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn8aQ9WTU3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Gm11421-201ENSMUST00000122124 294 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms