Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zc3h8Q9JJ48 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.59■□□□□ 0.57
Zc3h8Q9JJ48 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.58■□□□□ 0.57
Zc3h8Q9JJ48 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Zc3h8Q9JJ48 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.58■□□□□ 0.56
Zc3h8Q9JJ48 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3h8Q9JJ48 Spcs1-204ENSMUST00000226782 949 ntBASIC18.58■□□□□ 0.56
Zc3h8Q9JJ48 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Zc3h8Q9JJ48 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zc3h8Q9JJ48 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h8Q9JJ48 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h8Q9JJ48 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.57■□□□□ 0.56
Zc3h8Q9JJ48 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h8Q9JJ48 Gm8493-201ENSMUST00000196881 489 ntBASIC18.57■□□□□ 0.56
Zc3h8Q9JJ48 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.57■□□□□ 0.56
Zc3h8Q9JJ48 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h8Q9JJ48 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Zc3h8Q9JJ48 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h8Q9JJ48 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zc3h8Q9JJ48 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h8Q9JJ48 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Zc3h8Q9JJ48 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h8Q9JJ48 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Zc3h8Q9JJ48 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.56■□□□□ 0.56
Zc3h8Q9JJ48 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h8Q9JJ48 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Zc3h8Q9JJ48 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.56■□□□□ 0.56
Zc3h8Q9JJ48 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h8Q9JJ48 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zc3h8Q9JJ48 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h8Q9JJ48 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h8Q9JJ48 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h8Q9JJ48 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h8Q9JJ48 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h8Q9JJ48 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Zc3h8Q9JJ48 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Zc3h8Q9JJ48 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Zc3h8Q9JJ48 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h8Q9JJ48 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zc3h8Q9JJ48 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Gm43173-201ENSMUST00000202246 593 ntBASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zc3h8Q9JJ48 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.53■□□□□ 0.56
Zc3h8Q9JJ48 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zc3h8Q9JJ48 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Zc3h8Q9JJ48 Serp2-204ENSMUST00000228055 705 ntBASIC18.53■□□□□ 0.56
Zc3h8Q9JJ48 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zc3h8Q9JJ48 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
Zc3h8Q9JJ48 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Zc3h8Q9JJ48 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Zc3h8Q9JJ48 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Zc3h8Q9JJ48 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Zc3h8Q9JJ48 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Zc3h8Q9JJ48 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Zc3h8Q9JJ48 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 Gm43017-201ENSMUST00000198296 752 ntBASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Zc3h8Q9JJ48 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.5■□□□□ 0.55
Zc3h8Q9JJ48 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms