Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rhox4bQ9JI43 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rhox4bQ9JI43 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rhox4bQ9JI43 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rhox4bQ9JI43 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.04■□□□□ 0.16
Rhox4bQ9JI43 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rhox4bQ9JI43 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rhox4bQ9JI43 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rhox4bQ9JI43 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.02■□□□□ 0.16
Rhox4bQ9JI43 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rhox4bQ9JI43 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rhox4bQ9JI43 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rhox4bQ9JI43 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.02■□□□□ 0.16
Rhox4bQ9JI43 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rhox4bQ9JI43 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rhox4bQ9JI43 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Rhox4bQ9JI43 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rhox4bQ9JI43 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.02■□□□□ 0.15
Rhox4bQ9JI43 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rhox4bQ9JI43 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms